MirGeneDB 2.1

103 microRNA genes with seed GAUUGUC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Mmu-Mir-219-P3 mmu-mir-219a-1 MIR-219 GAUUGUC MIMAT0000664 MIMAT0017055 chr17 34025010 34025072 - Gnathostomata Bilateria No 1
Sha-Mir-219-P3 None MIR-219 GAUUGUC None None GL856875.1 214687 214746 - Gnathostomata Bilateria No
Efe-Mir-219-P9 None MIR-219 GAUUGUC None None Efet.01.125734 1344 1402 - E. fetida Bilateria No
Sme-Mir-219-P10 sme-mir-219 MIR-219 GAUUGUC MIMAT0004006 MIMAT0012118 NNSW01000387_dd_Smes_g4_387 101916 101988 + S. mediterranea Bilateria No 1
Tca-Mir-219 tca-mir-219 MIR-219 GAUUGUC MIMAT0008377 MIMAT0019121 LG3 5656978 5657037 + Bilateria Bilateria No 1
Mal-Mir-219-P2b None MIR-219 GAUUGUC None None KV884714.1 2562206 2562271 + Clupeocephala Bilateria No 1 1 1
Xla-Mir-219-P2c None MIR-219 GAUUGUC None None NC_030739.1 32552450 32552516 - X. laevis Bilateria No 1
Dan-Mir-219 dan-mir-219 MIR-219 GAUUGUC MIMAT0008474 None scaffold_13337 8265367 8265428 + Bilateria Bilateria No 1
Tni-Mir-219-P2a None MIR-219 GAUUGUC None None 4 1194347 1194413 + Clupeocephala Bilateria Unknown 1
Mdo-Mir-219-P2 mdo-mir-219-1 MIR-219 GAUUGUC MIMAT0004134 MIMAT0026681 1 454138621 454138685 - Gnathostomata Bilateria No 1
Tgu-Mir-219-P2 tgu-mir-219b MIR-219 GAUUGUC None MIMAT0014464 17 5804932 5804998 + Gnathostomata Bilateria No 1
Ocu-Mir-219-P2 ocu-mir-219b MIR-219 GAUUGUC MIMAT0048352 MIMAT0048353 chrUn0149 254882 254946 + Gnathostomata Bilateria No 1
Cfa-Mir-219-P2 cfa-mir-219-2 MIR-219 GAUUGUC MIMAT0006611 MIMAT0006729 chr9 55139107 55139171 + Gnathostomata Bilateria No 1
Cgi-Mir-219 None MIR-219 GAUUGUC None None scaffold517 74689 74747 + Bilateria Bilateria No
Mml-Mir-219-P2 mml-mir-219-2 MIR-219 GAUUGUC MIMAT0006245 MIMAT0006246 chr15 10477851 10477915 + Gnathostomata Bilateria No 1
Sme-Mir-219-P11 sme-mir-219 MIR-219 GAUUGUC MIMAT0004006 MIMAT0012118 NNSW01000123_dd_Smes_g4_123 40416 40488 + S. mediterranea Bilateria No 1
Tni-Mir-219-P2b tni-mir-219-1 MIR-219 GAUUGUC MIMAT0002901 None 12 10155057 10155122 - Clupeocephala Bilateria Unknown 1 1
Mal-Mir-219-P3a None MIR-219 GAUUGUC None None KV885154.1 139278 139343 - Clupeocephala Bilateria No 1 1
Sto-Mir-219-P2 None MIR-219 GAUUGUC None None BFAA01005837.1 16504 16569 + Gnathostomata Bilateria No
Pma-Mir-219-o1 None MIR-219 GAUUGUC None None NW_022638164.1 322376 322438 - P. marinus Bilateria Unknown 1
Pfl-Mir-219 None MIR-219 GAUUGUC None None LD345001.1 105047 105112 - Bilateria Bilateria Unknown 1 1
Xla-Mir-219-P2d None MIR-219 GAUUGUC None None NW_016694827.1 651974 652040 - X. laevis Bilateria No 1 1
Mdo-Mir-219-P3 mdo-mir-219-2 MIR-219 GAUUGUC MIMAT0004134 MIMAT0031109 2 270698645 270698704 + Gnathostomata Bilateria Unknown 1
Ami-Mir-219-P2 ami-mir-219b MIR-219 GAUUGUC MIMAT0038250 MIMAT0038251 NW_017713629.1 13580119 13580185 + Gnathostomata Bilateria No 1
Ocu-Mir-219-P3 ocu-mir-219a MIR-219 GAUUGUC MIMAT0048350 MIMAT0048351 chr12 23632838 23632901 + Gnathostomata Bilateria No 1
Pbv-Mir-219-P3 pbv-mir-219-1 MIR-219 GAUUGUC MIMAT0039029 None KE960054.1 25931 25986 - Gnathostomata Bilateria Unknown 1
Cfa-Mir-219-P3 cfa-mir-219-1 MIR-219 GAUUGUC MIMAT0006611 None chr12 2670928 2670991 + Gnathostomata Bilateria No 1
Mml-Mir-219-P3 mml-mir-219-1 MIR-219 GAUUGUC MIMAT0002575 None chr4 34051842 34051905 + Gnathostomata Bilateria No 1
Tni-Mir-219-P3a tni-mir-219-2 MIR-219 GAUUGUC MIMAT0002901 None Un_random 16276637 16276702 + Clupeocephala Bilateria Unknown 1
Bge-Mir-219 None MIR-219 GAUUGUC None None KZ614940.1 254374 254433 - Bilateria Bilateria No 1
Mal-Mir-219-P3b None MIR-219 GAUUGUC None None KV884920.1 559082 559145 - Clupeocephala Bilateria No 1
Lpo-Mir-219-P20 None MIR-219 GAUUGUC None None NW_013665780.1 615506 615564 - L. polyphemus Bilateria Unknown 1 1
Sto-Mir-219-P3-v1 None MIR-219 GAUUGUC None None BFAA01017937.1 11339 11405 + Gnathostomata Bilateria No 1
Cte-Mir-219 cte-mir-219 MIR-219 GAUUGUC MIMAT0009556 None CAPTEscaffold_273 18981 19041 + Bilateria Bilateria Unknown 1
Pma-Mir-219-o2 None MIR-219 GAUUGUC None None NC_046127.1 7380300 7380363 - P. marinus Bilateria Unknown 1
Spu-Mir-219 spu-mir-219 MIR-219 GAUUGUC MIMAT0009685 MIMAT0022953 AAGJ06000004.1 25977850 25977910 - Bilateria Bilateria No 1
Xtr-Mir-219-P2 xtr-mir-219 MIR-219 GAUUGUC MIMAT0003632 None chr8 7839296 7839362 + Gnathostomata Bilateria No 1
Dmo-Mir-219 dmo-mir-219 MIR-219 GAUUGUC MIMAT0008638 None scaffold_6680 4316926 4316988 - Bilateria Bilateria No 1
Ami-Mir-219-P3 ami-mir-219a MIR-219 GAUUGUC MIMAT0038248 MIMAT0038249 NW_017711269.1 103736 103791 - Gnathostomata Bilateria No 1 1 1
Obi-Mir-219 None MIR-219 GAUUGUC None None KQ429255 139487 139544 - Bilateria Bilateria No 1
Tni-Mir-219-P3b None MIR-219 GAUUGUC None None 8 6475886 6475950 - Clupeocephala Bilateria Unknown 1 1
Dre-Mir-219-P2a dre-mir-219-1 MIR-219 GAUUGUC MIMAT0001286 None chr10 10329476 10329540 - Clupeocephala Bilateria No 1
Lpo-Mir-219-P21 None MIR-219 GAUUGUC None None NW_013668279.1 46214 46273 + L. polyphemus Bilateria Unknown 1 1 1
Sto-Mir-219-P3-v2 None MIR-219 GAUUGUC None None BFAA01017937.1 11339 11405 + Gnathostomata Bilateria No 1 1
Cin-Mir-219 cin-mir-219 MIR-219 GAUUGUC MIMAT0006113 MIMAT0015264 7 4370293 4370349 - Bilateria Bilateria Unknown 1 1
Pmi-Mir-219 pmi-mir-219 MIR-219 GAUUGUC MIMAT0032168 None JH776188.1 5024 5085 + Bilateria Bilateria No 1
Ete-Mir-219-P2 None MIR-219 GAUUGUC None None JH980366 6232915 6232979 + Gnathostomata Bilateria No 1
Rno-Mir-219-P2 rno-mir-219a-2 MIR-219 GAUUGUC MIMAT0000889 MIMAT0005446 chr3 8407443 8407507 - Gnathostomata Bilateria No 1
Cpo-Mir-219-P2 cpo-mir-219b MIR-219 GAUUGUC MIMAT0047128 MIMAT0047129 scaffold_27 3805724 3805788 + Gnathostomata Bilateria No 1
Cpi-Mir-219-P2 cpi-mir-219-2 MIR-219 GAUUGUC MIMAT0037848 MIMAT0037849 JH584612 7848477 7848543 - Gnathostomata Bilateria No 1
Hsa-Mir-219-P2 hsa-mir-219a-2 MIR-219 GAUUGUC MIMAT0000276 MIMAT0004675 chr9 128392632 128392696 - Gnathostomata Bilateria No 1
Ovu-Mir-219 None MIR-219 GAUUGUC None None RXHP01058932.1 4223 4280 + Bilateria Bilateria No 1
Aae-Mir-219 aae-mir-219 MIR-219 GAUUGUC MIMAT0014307 None supercont1.368 610337 610404 + Bilateria Bilateria No 1
Gmo-Mir-219-P2a gmo-mir-219-2 MIR-219 GAUUGUC None MIMAT0044227 GeneScaffold_3565 236428 236495 - Clupeocephala Bilateria No 1
Dpu-Mir-219 dpu-mir-219 MIR-219 GAUUGUC MIMAT0012645 None DAPPUscaffold_253 93596 93656 - Bilateria Bilateria No 1
Dre-Mir-219-P2b dre-mir-219-2 MIR-219 GAUUGUC MIMAT0001286 None chr5 65101371 65101437 + Clupeocephala Bilateria No 1 1
Lpo-Mir-219-P22 None MIR-219 GAUUGUC None None NW_013665794.1 694873 694931 - L. polyphemus Bilateria Unknown 1 1
Cmi-Mir-219-P2 None MIR-219 GAUUGUC None None KI635931.1 2921759 2921825 - Gnathostomata Bilateria No 1
Gja-Mir-219-P2 None MIR-219 GAUUGUC None None NW_015176565.1 28039 28105 + Gnathostomata Bilateria No 1
Mun-Mir-219-P2 None MIR-219 GAUUGUC None None 219-P1_LR594637.1:295957569-295957703 35 101 - Gnathostomata Bilateria Unknown 1
Ete-Mir-219-P3 None MIR-219 GAUUGUC None None JH980348 13433336 13433398 + Gnathostomata Bilateria Unknown 1
Rno-Mir-219-P3 rno-mir-219a-1 MIR-219 GAUUGUC MIMAT0000889 MIMAT0004741 chr20 3816184 3816247 - Gnathostomata Bilateria No 1
Oan-Mir-219-P2 oan-mir-219 MIR-219 GAUUGUC MIMAT0006899 MIMAT0006900 NC_041731.1 32222732 32222796 + Gnathostomata Bilateria No 1
Cpo-Mir-219-P3 None MIR-219 GAUUGUC None None 1646358196 140 203 + Gnathostomata Bilateria No 1
Cpi-Mir-219-P3 cpi-mir-219-1 MIR-219 GAUUGUC MIMAT0037848 None JH584591 148663 148719 + Gnathostomata Bilateria No 1 1 1
Lan-Mir-219 None MIR-219 GAUUGUC None None LFEI01000847 28789 28851 - Bilateria Bilateria No 1
Dno-Mir-219-P2 dno-mir-219b MIR-219 GAUUGUC MIMAT0047773 MIMAT0047774 JH564958 47850 47914 + Gnathostomata Bilateria No 1
Gmo-Mir-219-P3a gmo-mir-219-3 MIR-219 GAUUGUC None MIMAT0044313 GeneScaffold_752 202020 202079 - Clupeocephala Bilateria Unknown
Dre-Mir-219-P3a dre-mir-219-3 MIR-219 GAUUGUC MIMAT0001286 MIMAT0031989 chr19 18861780 18861840 - Clupeocephala Bilateria No 1 1
Lpo-Mir-219-P23 None MIR-219 GAUUGUC None None NW_013665944.1 552763 552821 + L. polyphemus Bilateria Unknown 1
Cmi-Mir-219-P3 None MIR-219 GAUUGUC None None AAVX02055268.1 1010 1073 + Gnathostomata Bilateria Unknown 1
Bfl-Mir-219 bfl-mir-219 MIR-219 GAUUGUC MIMAT0010012 None NC_049986.1 24495117 24495175 + Bilateria Bilateria Unknown 1
Gja-Mir-219-P3 None MIR-219 GAUUGUC None None NW_015167179.1 32413 32469 + Gnathostomata Bilateria Unknown 1
Dme-Mir-219 dme-mir-219 MIR-219 GAUUGUC MIMAT0000335 MIMAT0020803 3L 17315024 17315085 + Bilateria Bilateria No 1
Mun-Mir-219-P3-v1 None MIR-219 GAUUGUC None None 219-P2-v1_LR594634.1:205487529-205487662 35 101 - Gnathostomata Bilateria No 1 1
Gga-Mir-219-P2 gga-mir-219a MIR-219 GAUUGUC MIMAT0001170 None 17 5319595 5319661 + Gnathostomata Bilateria No 1
Aca-Mir-219-P2 aca-mir-219-1 MIR-219 GAUUGUC MIMAT0021884 MIMAT0021885 GL344072.1 36997 37061 + Gnathostomata Bilateria No 1
Efe-Mir-219-P7 None MIR-219 GAUUGUC None None Efet.01.135199 2555 2617 + E. fetida Bilateria No 1
Bta-Mir-219-P2 bta-mir-219-1 MIR-219 GAUUGUC None MIMAT0012547 NC_037338.1 98985288 98985352 - Gnathostomata Bilateria No 1
Dno-Mir-219-P3 dno-mir-219a MIR-219 GAUUGUC MIMAT0047771 MIMAT0047772 JH578991 782596 782658 - Gnathostomata Bilateria No 1
Gmo-Mir-219-P3b gmo-mir-219-1 MIR-219 GAUUGUC MIMAT0044115 None GeneScaffold_1282 19894 19956 - Clupeocephala Bilateria No 1 1
Isc-Mir-219 isc-mir-219 MIR-219 GAUUGUC MIMAT0012690 None DS658596 21129 21187 - Bilateria Bilateria No 1
Lpo-Mir-219-P24 None MIR-219 GAUUGUC None None NW_013666585.1 42578 42636 - L. polyphemus Bilateria Unknown 1 1
Ebu-Mir-219-P5 None MIR-219 GAUUGUC None None FYBX02010268.1 1198023 1198090 + E. burgeri Bilateria Unknown 1
Bla-Mir-219 None MIR-219 GAUUGUC None None Sc0000004 7222896 7222954 + Bilateria Bilateria No 1
Spt-Mir-219-P2 None MIR-219 GAUUGUC None None QEPC01005805.1 4884376 4884442 - Gnathostomata Bilateria Unknown 1
Dsi-Mir-219 dsi-mir-219 MIR-219 GAUUGUC MIMAT0008868 None 3L 16883503 16883564 + Bilateria Bilateria No 1
Lch-Mir-219-P2 None MIR-219 GAUUGUC None None JH126677.1 1821790 1821855 + Gnathostomata Bilateria Unknown 1
Mmu-Mir-219-P2 mmu-mir-219a-2 MIR-219 GAUUGUC MIMAT0000664 MIMAT0022841 chr2 29845645 29845709 - Gnathostomata Bilateria No 1
Sha-Mir-219-P2 None MIR-219 GAUUGUC None None AFEY01342777_Mir-219-P2 894 958 + Gnathostomata Bilateria No 1
Cli-Mir-219-P2 None MIR-219 GAUUGUC None None scaffold2035 7056 7122 + Gnathostomata Bilateria No 1
Aca-Mir-219-P3 aca-mir-219-2 MIR-219 GAUUGUC MIMAT0021884 MIMAT0021886 GL344404.1 891 949 - Gnathostomata Bilateria No 1
Efe-Mir-219-P8 None MIR-219 GAUUGUC None None Efet.01.56519 3866 3931 - E. fetida Bilateria No 1
Bta-Mir-219-P3 bta-mir-219-2 MIR-219 GAUUGUC None MIMAT0030444 NC_037350.1 7394820 7394882 + Gnathostomata Bilateria No 1
Mal-Mir-219-P2a None MIR-219 GAUUGUC None None KV884763.1 1243351 1243417 - Clupeocephala Bilateria No 1
Csc-Mir-219 None MIR-219 GAUUGUC None None NW_019385571.1 97769 97827 + Bilateria Bilateria Unknown 1
Loc-Mir-219-P2 None MIR-219 GAUUGUC None None LG21 3510032 3510098 + Gnathostomata Bilateria No 1
Ebu-Mir-219-P6 None MIR-219 GAUUGUC None None FYBX02009657.1 6260596 6260664 + E. burgeri Bilateria Unknown 1
Sko-Mir-219 sko-mir-219 MIR-219 GAUUGUC MIMAT0022768 None NW_003144276.1 316 377 - Bilateria Bilateria Unknown 1 1
Spt-Mir-219-P3 None MIR-219 GAUUGUC None None QEPC01009231.1 233014 233071 - Gnathostomata Bilateria Unknown 1 1
Dya-Mir-219 dya-mir-219 MIR-219 GAUUGUC MIMAT0009107 None 3L 16762607 16762668 - Bilateria Bilateria No 1
Lch-Mir-219-P3 None MIR-219 GAUUGUC None None JH127214.1 746139 746204 - Gnathostomata Bilateria Unknown 1 1
Dno-Mir-506-P3 dno-mir-508 MIR-506 GAUUGUC MIMAT0047954 MIMAT0047955 JH564535 697744 697800 + Eutheria Eutheria Unknown 1

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