MirGeneDB 2.1

34 microRNA genes with seed UGGCACU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Mml-Mir-96-P3-v2 mml-mir-183 MIR-96 UGGCACU MIMAT0002783 MIMAT0026603 chr3 155860353 155860412 - Bilateria Bilateria No 1
Cmi-Mir-96-P3-v2 None MIR-96 UGGCACU None None KI635871.1 2243507 2243566 + Bilateria Bilateria No
Cpo-Mir-96-P3-v2 cpo-mir-183 MIR-96 UGGCACU MIMAT0047050 MIMAT0047051 scaffold_11 50142395 50142454 - Bilateria Bilateria Unknown 1
Gga-Mir-96-P3-v2 gga-mir-183 MIR-96 UGGCACU MIMAT0001191 None 1 1479856 1479915 - Bilateria Bilateria No 1
Ami-Mir-96-P3-v2 ami-mir-183 MIR-96 UGGCACU MIMAT0038196 MIMAT0038197 NW_017709854.1 28193884 28193943 + Bilateria Bilateria No 1
Gja-Mir-96-P3-v2 None MIR-96 UGGCACU None None NW_015171061.1 25416 25475 + Bilateria Bilateria Unknown 1
Xla-Mir-96-P3c-v2 None MIR-96 UGGCACU None None NC_030728.1 77405966 77406025 + X. laevis Bilateria No 1
Mun-Mir-96-P3-v2 None MIR-96 UGGCACU None None 96-P3-v1_LR594641.1:18222814-18223075 102 161 + Bilateria Bilateria Unknown 1
Mal-Mir-96-P3b-v2 None MIR-96 UGGCACU None None KV884693.1 181000 181059 + Clupeocephala Bilateria No 1
Loc-Mir-96-P3-v2 None MIR-96 UGGCACU None None LG8 20420184 20420243 - Bilateria Bilateria Unknown 1
Sha-Mir-96-P3-v2 None MIR-96 UGGCACU None None GL861654.1 986810 986869 - Bilateria Bilateria No 1
Rno-Mir-96-P3-v2 rno-mir-183 MIR-96 UGGCACU MIMAT0000860 MIMAT0017141 chr4 57463592 57463651 - Bilateria Bilateria No 1
Dno-Mir-96-P3-v2 dno-mir-183 MIR-96 UGGCACU MIMAT0047701 MIMAT0047702 JH568910 1129148 1129207 - Bilateria Bilateria No 1
Pbv-Mir-96-P3-v2 pbv-mir-183 MIR-96 UGGCACU MIMAT0038982 None KE958924.1 50062 50121 - Bilateria Bilateria Unknown 1
Lpo-Mir-96-P2s-v2 None MIR-96 UGGCACU None None NW_013666424.1 65544 65601 + L. polyphemus Bilateria Unknown
Xla-Mir-96-P3d-v2 xla-mir-183 MIR-96 UGGCACU MIMAT0046493 MIMAT0046494 NC_030729.1 63429416 63429475 - X. laevis Bilateria No 1
Gmo-Mir-96-P3a-v2 gmo-mir-183 MIR-96 UGGCACU MIMAT0044261 MIMAT0044262 GeneScaffold_4098 12670 12729 + Clupeocephala Bilateria Unknown 1
Cli-Mir-96-P3-v2 cli-mir-183 MIR-96 UGGCACU MIMAT0038558 MIMAT0038559 scaffold121 1261592 1261651 + Bilateria Bilateria No 1
Bta-Mir-96-P3-v2 bta-mir-183 MIR-96 UGGCACU MIMAT0009245 None NC_037331.1 93596162 93596221 - Bilateria Bilateria Unknown 1
Hsa-Mir-96-P3-v2 hsa-mir-183 MIR-96 UGGCACU MIMAT0000261 MIMAT0004560 chr7 129774928 129774987 - Bilateria Bilateria No 1
Mmu-Mir-96-P3-v2 mmu-mir-183 MIR-96 UGGCACU MIMAT0000212 MIMAT0004539 chr6 30169672 30169731 - Bilateria Bilateria No 1
Sto-Mir-96-P3-v2 None MIR-96 UGGCACU None None BFAA01006258.1 22497 22556 - Bilateria Bilateria No
Cpi-Mir-96-P3-v2 cpi-mir-183 MIR-96 UGGCACU MIMAT0037800 None JH584440 1633084 1633143 + Bilateria Bilateria Unknown 1
Dre-Mir-96-P3a-v2 dre-mir-183 MIR-96 UGGCACU MIMAT0001273 MIMAT0031921 chr4 15074582 15074641 + Clupeocephala Bilateria Yes 1
Lpo-Mir-96-P2t-v2 None MIR-96 UGGCACU None None NW_013665634.1 1447497 1447553 + L. polyphemus Bilateria Unknown 1
Oan-Mir-96-P3-v2 oan-mir-183 MIR-96 UGGCACU MIMAT0006805 None NC_041737.1 47132913 47132972 - Bilateria Bilateria No 1
Cfa-Mir-96-P3-v2 cfa-mir-183 MIR-96 UGGCACU MIMAT0006621 None chr14 7068543 7068602 + Bilateria Bilateria No 1
Lpo-Mir-96-P1r-v2 None MIR-96 UGGCACU None None NW_013665929.1 529177 529235 - L. polyphemus Bilateria No 1
Mdo-Mir-96-P3-v2 mdo-mir-183 MIR-96 UGGCACU MIMAT0004146 MIMAT0026691 8 189668278 189668337 - Bilateria Bilateria No 1
Ete-Mir-96-P3-v2 None MIR-96 UGGCACU None None JH980321 22675321 22675380 - Bilateria Bilateria No 1
Xtr-Mir-96-P3-v2 xtr-mir-183 MIR-96 UGGCACU MIMAT0003612 None chr3 77399665 77399724 + Bilateria Bilateria No 1
Lpo-Mir-96-P2v-v2 None MIR-96 UGGCACU None None NW_013665621.1 1338514 1338570 - L. polyphemus Bilateria Unknown
Ocu-Mir-96-P3-v2 ocu-mir-183 MIR-96 UGGCACU MIMAT0048287 MIMAT0048288 chr7 14826895 14826954 + Bilateria Bilateria Unknown 1
Mal-Mir-96-P3a-v2 None MIR-96 UGGCACU None None KV884729.1 3066307 3066366 - Clupeocephala Bilateria No 1

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