MirGeneDB 3.0

7 Cavia porcellus microRNA genes with seed AGCAGCA (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Cpo-Mir-15-P1a cpo-mir-15a MIR-15 AGCAGCA MIMAT0046849 MIMAT0046850 scaffold_6 59875535 59875593 - Gnathostomata Olfactores No
Cpo-Mir-15-P1b cpo-mir-15b MIR-15 AGCAGCA MIMAT0046851 MIMAT0046852 scaffold_8 57379064 57379123 + Gnathostomata Olfactores No
Cpo-Mir-15-P1c cpo-mir-424 MIR-15 AGCAGCA MIMAT0047243 MIMAT0047244 scaffold_128 2879319 2879377 - Gnathostomata Olfactores No
Cpo-Mir-15-P1d cpo-mir-497 MIR-15 AGCAGCA MIMAT0047295 MIMAT0047296 scaffold_61 9616778 9616839 + Gnathostomata Olfactores No 1
Cpo-Mir-15-P2a cpo-mir-16a MIR-15 AGCAGCA MIMAT0046853 MIMAT0046854 scaffold_6 59875390 59875454 - Gnathostomata Olfactores No 1 1
Cpo-Mir-15-P2b cpo-mir-16b MIR-15 AGCAGCA MIMAT0046855 MIMAT0046856 scaffold_8 57379204 57379268 + Gnathostomata Olfactores No 1
Cpo-Mir-15-P2d cpo-mir-195 MIR-15 AGCAGCA MIMAT0047076 MIMAT0047077 scaffold_61 9617085 9617145 + Gnathostomata Olfactores No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix