10           20        30        40        50         
UUCGGAUCACACGAGGG---|  C     G   UC               G     GUGUG 
                    AAG GAGUU UUG  UUUGGUUAUCUAGCU UAUGA     U
                    UUC CUCAA AAU  AAGCCAAUAGAUCGA AUACU     U
ACACGUCGUACUUCUAGUAC^  -     A   GA               A     UCUGG 
.       110       100         90        80        70        60