10          20        30        40        50        60
CAGCUUCUCCAUCACUG--|   UC                  A   G     G UGUUAG 
                   CCAU  UGUCAGAUAGCUUAUCAG CUG UGUUG C      C
                   GGUA  GCGGUCUAUCGGAUGGUU GAC ACAGC G      U
CAACUAGACUACCUUCCAC^   CA                  -   A     - GUGGAC 
.       110       100        90        80         70