10            20        30        40        50         
ACAGUCAACAGAUGUGC----| CA   AAA  C             AUU     UGUUGAA 
                     UC  UCU   GC UGAUAUGUUUGAU   UGGUU       A
                     AG  AGA   CG ACUAUACAAGCUA   GCCAA       U
GCUGUAGAACCACUUUCCGAG^ AA   A--  C             CGU     CCGAUAG 
.       110       100          90        80        70        60