10            20         30        40        50        60  
UUACAUCAGUUUCUGCC----|  CGU     -  A        A         UG     GUGCU 
                     CGG   GAUUC CC CGUGCUGC UCAGGUGCU  UGACU     \
                     GCC   CUAAG GG GCGCGAUG AGUCCAUGG  ACUGA     G
UGAUGGUUCUUCUAAAAAGGG^  ---     A  C        A         --     AACAU 
 120       110       100           90        80          70