10          20        30        40        50        
AAUGGAACACGUCAGAGAA--|   GCAA      C     A        G    UAAU 
                     ACGG    AUGUCG UGUUG CACAGGUA AGUG    C
                     UGCC    UGCAGC ACAAU GUGUCUAU UCAC    A
UAUACUGCAUACAACAUAUAC^   AACA      A     A        A    UGCG 
      110       100        90        80        70        60