MirGeneDB 2.1

MirGeneDB ID

Aae-Mir-92-o55

Family name MIR-92 (all species)
Seed AUUGCAC
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-92b
Paralogues Aae-Mir-92-o54 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) A. aegypti
Node of Origin (family) Bilateria
Genome context
(Aaeg_L3)
supercont1.116: 1319161-1319222 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGAGCAGGAAAGGUUAGGGCUCCGAAUGUAGGUCGUGACUUGUGCCCGUUUGCUGAAUUUUAAUGGUCAAAUUGCACUUGUCCCGGCCUGCAGCCAAGAGCCAGAGCAUCGCCAACGUUGA
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Structure
        10         20         30        40        50        60 
UUGAGCAGGAAAGGUUAG-     CGAA-|        U   UU    CC     CUGAAUU 
                   GGCUC     UGUAGGUCG GAC  GUGC  GUUUG       \
                   CCGAG     ACGUCCGGC CUG  CACG  UAAAC       U
AGUUGCAACCGCUACGAGA     AACCG^        C   UU    U-     UGGUAAU 
120       110       100        90        80         70
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe Fe Fe To To To
Star sequence

Aae-Mir-92-o55_5p*

mirBase accessionMIMAT0014321
Sequence
0- AGGUCGUGACUUGUGCCCGUUUG -23
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Mature sequence

Aae-Mir-92-o55_3p

mirBase accessionMIMAT0014322
Sequence
40- AAUUGCACUUGUCCCGGCCUGC -62
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