MirGeneDB ID | Aae-Mir-929-P2 |
Family name |
MIR-929 (all species) |
Seed |
AAUUGAC |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-929-2
|
Paralogues |
Aae-Mir-929-P1
|
Orthologues |
Aga-Mir-929
Dan-Mir-929
Dme-Mir-929
Dmo-Mir-929
Dsi-Mir-929
Dya-Mir-929
Gpa-Mir-929
Hme-Mir-929
Tca-Mir-929
|
Node of Origin (locus) |
A. aegypti
|
Node of Origin (family) |
Neoptera
|
Genome context (Aaeg_L3) |
supercont1.260: 788409-788467 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUGGACAGAGAUAGUGCCUACGACUGGUCCAAAUUGACUCUAGUAGGGAGUCCUUGUGUACGAGUGACUCCCUAACGGAGUCAGAUUGAACCCGGUAGGAUGGAACCCCCUAUUCCCCC
Get precursor sequence
|
Structure | 10 20 30 40 50
AUGGACAGAGAUAGUGC----| GACU C A AG CCUUGUG
CUAC GGU CAA UUGACUCU UAGGGAGU \
GAUG CCA GUU GACUGAGG AUCCCUCA U
CCCCCUUAUCCCCCAAGGUAG^ GC-- A A CA GUGAGCA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Aae-Mir-929-P2_5p |
mirBase accession | MIMAT0015648 |
Sequence |
0- AAAUUGACUCUAGUAGGGAGU -21
Get sequence
|
Star sequence |
Aae-Mir-929-P2_3p* |
mirBase accession | None |
Sequence |
38- UCCCUAACGGAGUCAGAUUGA -59
Get sequence
|