| MirGeneDB ID | Aca-Mir-5435 |
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| Family name |
MIR-5435 (all species) |
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| Seed |
AUGACCU |
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| Species |
Green anole lizard (Anolis carolinensis) |
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| MiRBase ID |
aca-mir-5435b
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. carolinensis
|
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| Node of Origin (family) |
A. carolinensis
|
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Genome context
(anoCar2) |
2: 25825607-25825663 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUACAGCUGGAAGUUGCCAGAGUCAUUCUGGAUGACCUAGAAAAUUCCUAGAGAGGUAUCAUAUUUAGGAAUUUGCUAGUUCUUCCAGGAAGACUGCAUGGUAAUCUGCAGUGGAAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUACAGCUGGAAGUUGCCAG--| A U C A GAGGU
AGUC UUCUGGA GA CUAG AAAUUCCUAGA \
UCAG AGGACCU CU GAUC UUUAAGGAUUU A
GAAGGUGACGUCUAAUGGUACG^ A U U G AUACU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Aca-Mir-5435_5p |
| mirBase accession | MIMAT0022090 |
|---|
| Sequence |
0- GAUGACCUAGAAAAUUCCUAGA -22
Get sequence
|
|---|
| Co-mature sequence |
Aca-Mir-5435_3p |
| mirBase accession | MIMAT0022091 |
|---|
| Sequence |
35- UAGGAAUUUGCUAGUUCUUCCA -57
Get sequence
|
|---|
