MirGeneDB 3.0
MirGeneDB ID

Bfl-Mir-103-P6

Family name MIR-103 (all species)
Seed AGCAGCA
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-2064
Paralogues Bfl-Mir-103-P5  Bfl-Mir-103-P7  Bfl-Mir-103-P8 
Orthologues Bla-Mir-103-P6  Hmi-Mir-103  Pfl-Mir-103  Pmi-Mir-103  Sko-Mir-103  Spu-Mir-103  Sro-Mir-103  Xbo-Mir-103 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049987.1: 7507428-7507486 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-103-P6)		 Mir-103-P6 NC_049987.1: 7507428-7507486 [-] UCSC
Mir-103-P5 NC_049987.1: 7512038-7512104 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GAGAGCACUGCCCAUUCAGCCACCUUGUCCACGGUUGCAUUGUGUUGGUCUUUGUAGCGUGUGAACAAAGCAGCACUGUGCAACUGUGUAGAUGGAUGGCCCAUGCUGCAGUUACCAGG
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Structure
        10         20         30        40        50          
GAGAGCACUGCCCAUUCA-    -| UUGUC           U      GU     UAGCG 
                   GCCA CC     CACGGUUGCAU GUGUUG  CUUUG     \
                   CGGU GG     GUGUCAACGUG CACGAC  GAAAC     U
GGACCAUUGACGUCGUACC    A^ UAGAU           U      --     AAGUG 
       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Bfl-Mir-103-P6_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACGGUUGCAUUGUGUUGGUCUUUG -24
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Mature sequence

Bfl-Mir-103-P6_3p
mirBase accessionMIMAT0009990
Sequence 
37- AAGCAGCACUGUGCAACUGUGU -59
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