| MirGeneDB ID | Bla-Novel-5 |
|---|
| Family name |
BLA-NOVEL-5 (all species) |
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| Seed |
CUGACAU |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. lanceolatum
|
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| Node of Origin (family) |
B. lanceolatum
|
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Genome context
(BraLan2) |
Sc0000104: 700174-700235 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAUUUUCUCCAUUGCCCACACCUGGAGUUUACUGACAUCCUAGAAGUGCAAAAGUAGAUUUUCCCAUCUUUGGGCUUUUAAGAUGUCAGCAAAGUCUGGCUGUCAUCCUAACUUCCUCAAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CAUUUUCUCCAUUGCCC--| C UG G A C G AGUAGAU
ACA C GA UUU CUGACAUC UAGAAGU CAAA U
UGU G CU AAA GACUGUAG AUUUUCG GUUU U
AGAACUCCUUCAAUCCUAC^ C GU G C A G CUACCCU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Bla-Novel-5_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACUGACAUCCUAGAAGUGCAAA -22
Get sequence
|
|---|
| Star sequence |
Bla-Novel-5_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- UGGGCUUUUAAGAUGUCAGCAA -62
Get sequence
|
|---|
