MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-192-P1

Family name MIR-192 (all species)
Seed UGACCUA
Species Cow (Bos taurus)
MiRBase ID bta-mir-215
Paralogues Bta-Mir-192-P2 
Orthologues Aca-Mir-192-P1  Ami-Mir-192-P1  Cfa-Mir-192-P1  Cli-Mir-192-P1  Cmi-Mir-192-P1  Cpi-Mir-192-P1  Cpo-Mir-192-P1  Dno-Mir-192-P1  Ebu-Mir-192-o1  Ete-Mir-192-P1  Gga-Mir-192-P1  Gja-Mir-192-P1  Hsa-Mir-192-P1  Lch-Mir-192-P1  Mdo-Mir-192-P1  Mml-Mir-192-P1  Mmu-Mir-192-P1  Mun-Mir-192-P1  Oan-Mir-192-P1  Oan-Mir-192-P1-as  Ocu-Mir-192-P1  Pbv-Mir-192-P1  Pma-Mir-192-o1  Rno-Mir-192-P1  Spt-Mir-192-P1  Sto-Mir-192-P1  Tgu-Mir-192-P1  Xla-Mir-192-P1a  Xla-Mir-192-P1b  Xtr-Mir-192-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037343.1: 23607654-23607713 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P1)
Mir-192-P1 NC_037343.1: 23607654-23607713 [-] UCSC Ensembl
Mir-194-P1 NC_037343.1: 23607952-23608009 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUUAUUAUUCAGAAAUGGUGUACAGGAAAAUGACCUAUGAAUUGACAGACAACGUGACUAAGUCUGUCUGUCAUUUCUGUAGGCCAAUGUUCUGUAUAUCUCUGCGACUUCAAAAUCAG
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Structure
        10          20        30         40        50         
AGUUAUUAUUCAGAAAU--           AAA  A     -|  U         ACGUGA 
                   GGUGUACAGGA   UG CCUAU GAA UGACAGACA      \
                   CUAUAUGUCUU   AC GGAUG CUU ACUGUCUGU      C
GACUAAAACUUCAGCGUCU           GUA  C     U^  U         CUGAAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-192-P1_5p

mirBase accessionMIMAT0003797
Sequence
0- AUGACCUAUGAAUUGACAGACA -22
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Proposed targets TargetScanVert: bta-miR-215
Star sequence

Bta-Mir-192-P1_3p*

mirBase accessionNone
Sequence
37- UCUGUCAUUUCUGUAGGCCAAUG -60
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