| MirGeneDB ID | Bta-Mir-506-P2g |
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| Family name |
MIR-506 (all species) |
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| Seed |
ACUUCAG |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
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| Paralogues |
Bta-Mir-506-P1
Bta-Mir-506-P2f
Bta-Mir-506-P2h
Bta-Mir-506-P3
Bta-Mir-506-P6
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| Orthologues |
Cpo-Mir-506-o2
Dno-Mir-506-P2
Hsa-Mir-506-P2
Mml-Mir-506-P2
Mmu-Mir-506-P2
Ocu-Mir-506-P2
Rno-Mir-506-P2
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| Node of Origin (locus) |
B. taurus
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 29998359-29998416 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCACGUUUCACUAUGCUGCGUGCAGUGCUGCACUUCAGGAAGUGCCAUCCAUGUGGAUAAAAAUAUGAUUGGUACUUCUUAGAGUGGAGCAAUACACAGCAAAUCCAUCAGUGCUGAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CCACGUUUCACUAUGCU- -| CAG G UC UC UGUGGA
GC GUG UGCU CACU AGGAAGUGCCA CA U
CG CAC ACGA GUGA UUCUUCAUGGU GU A
CAGUCGUGACUACCUAAA A^ AUA G GA UA AUAAAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-506-P2g_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- CACUUCAGGAAGUGCCAUCCA -21
Get sequence
|
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| Star sequence |
Bta-Mir-506-P2g_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
37- AUUGGUACUUCUUAGAGUGGA -58
Get sequence
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