MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-95-P4

Family name MIR-95 (all species)
Seed AAGUCUU
Species Cow (Bos taurus)
MiRBase ID
Paralogues Bta-Mir-95-P1  Bta-Mir-95-P2  Bta-Mir-95-P3-v1  Bta-Mir-95-P3-v2 
Orthologues Cfa-Mir-95-P4  Cpo-Mir-95-P4  Ete-Mir-95-P4  Hsa-Mir-95-P4  Mml-Mir-95-P4  Mmu-Mir-95-P4  Ocu-Mir-95-P4  Rno-Mir-95-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037357.1: 62992996-62993058 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUUGUGUUUCUUCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGCAAGAAUAAGAGAACCAACAAGUCUUAUUUGAGCACCUGUUAUGUGGAGGAUAAAAAGCUACAACCCAAA
Get precursor sequence
Structure
        10           20        30        40         50        60 
CGUUGUGUUUCUUCAUG---|  GG            C     -    U       GCAAGAAU 
                    CCU  CAUAUAGCAGGU CUCAA UAAG AUUUGUU        \
                    GGA  GUGUAUUGUCCA GAGUU AUUC UGAACAA        A
AAACCCAACAUCGAAAAAUA^  G-            C     U    -       CCAAGAGA 
 120       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-95-P4_5p*

mirBase accessionNone
Sequence
0- AGGUCCUCAAUAAGUAUUUGUU -22
Get sequence
Mature sequence

Bta-Mir-95-P4_3p

mirBase accessionNone
Sequence
41- CAAGUCUUAUUUGAGCACCUGU -63
Get sequence