MirGeneDB 2.1

MirGeneDB ID

Cfa-Novel-24

Family name CFA-NOVEL-24 (all species)
Seed ACGUUGG
Species Dog (Canis familiaris)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) C. familiaris
Node of Origin (family) C. familiaris
Genome context
(canFam3_add)
chrX: 37879009-37879064 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGGCCUCCGGAGCUCAGGCUCACCUCCAGCUCCGGGACUCGCCACCGUGUUCGUUGUCAAGAGAAACGUUGGCAGCCCCAGAUCUGGAUGUCAGCAGCACCCUGGCCUGACUGCU
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Structure
        10          20        30        40        50        
GGGGCCUCCGGAGCUCAG--|  C  C     C  C   A  C    C   G   GUUG 
                    GCU AC UCCAG UC GGG CU GCCA CGU UUC    U
                    CGA UG AGGUC AG CCC GA CGGU GCA AAG    C
UCGUCAGUCCGGUCCCACGA^  C  U     U  A   C  -    U   -   AGAA 
    110       100        90        80         70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Novel-24_5p*

mirBase accessionNone
Sequence
0- CUCCGGGACUCGCCACCGUGUUC -23
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Mature sequence

Cfa-Novel-24_3p

mirBase accessionNone
Sequence
35- AACGUUGGCAGCCCCAGAUCU -56
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