MirGeneDB 2.1
MirGeneDB ID

Cgi-Mir-375-P3

Family name MIR-375 (all species)
Seed UUGUUCA
Species Pacific oyster (Crassostrea gigas)
MiRBase ID
Paralogues Cgi-Mir-375-P4 
Orthologues Aae-Mir-375  Aca-Mir-375  Ami-Mir-375  Asu-Mir-375  Bfl-Mir-375  Bge-Mir-375  Bla-Mir-375  Bpl-Mir-375  Bta-Mir-375  Cbr-Mir-375  Cel-Mir-375  Cfa-Mir-375  Cin-Mir-375  Cli-Mir-375  Cpi-Mir-375  Cpo-Mir-375  Cte-Mir-375  Dan-Mir-375  Dma-Mir-375  Dme-Mir-375  Dmo-Mir-375  Dno-Mir-375  Dpu-Mir-375  Dsi-Mir-375  Dya-Mir-375  Ebu-Mir-375  Efe-Mir-375  Esc-Mir-375  Ete-Mir-375  Gga-Mir-375  Gja-Mir-375  Hme-Mir-375  Hsa-Mir-375  Isc-Mir-375  Lan-Mir-375  Lch-Mir-375  Lgi-Mir-375  Loc-Mir-375  Mdo-Mir-375  Mml-Mir-375  Mmu-Mir-375  Npo-Mir-375  Oan-Mir-375  Obi-Mir-375  Ocu-Mir-375  Ovu-Mir-375  Pbv-Mir-375  Pfl-Mir-375  Pmi-Mir-375  Rno-Mir-375  Sha-Mir-375  Sko-Mir-375  Spt-Mir-375  Spu-Mir-375  Sto-Mir-375  Tca-Mir-375  Tgu-Mir-375  Xtr-Mir-375 
Node of Origin (locus) C. gigas
Node of Origin (family) Bilateria
Genome context
(CGI_GCA_000297895.1)		 scaffold527: 289953-290015 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAGAUGUACAGAAAGUACGGAUGCUAAUUAACACGAGCCAAGUGCAACAAUGCGUGAAGAAAAAAAAAAGUUUUGUUCAGUCGGCUCGCGUUAAUACAUCAUCCGAAAUCAACAAGCCAUCAA
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Structure
        10         20         30        40        50        60 
GAGAUGUACAGAAAGUA-      CUA-|     A      AAG  C     U  GUGAAGA 
                  CGGAUG    AUUAAC CGAGCC   UG AACAA GC       A
                  GCCUAC    UAAUUG GCUCGG   AC UUGUU UG       A
AACUACCGAACAACUAAA      UACA^     C      CUG  -     U  AAAAAAA 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
A- D- D- Eg F- Gi He Ju L- Ma Ma Pe Re Sp Um Ea Fe Ha La Ma
Star sequence

Cgi-Mir-375-P3_5p*
mirBase accessionNone
Sequence 
0- ACACGAGCCAAGUGCAACAAUGC -23
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Mature sequence

Cgi-Mir-375-P3_3p
mirBase accessionNone
Sequence 
41- UUUGUUCAGUCGGCUCGCGUUA -63
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