MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-1805

Family name MIR-1805 (all species)
Seed GUAUUGG
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-1805
Paralogues
Orthologues Aca-Mir-1805  Ami-Mir-1805  Cpi-Mir-1805  Gga-Mir-1805  Gja-Mir-1805-P3  Gja-Mir-1805-P4  Mdo-Mir-1805  Neu-Mir-1805  Pbv-Mir-1805  Sha-Mir-1805  Spt-Mir-1805  Tgu-Mir-1805  Xla-Mir-1805-P1  Xla-Mir-1805-P2  Xtr-Mir-1805 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(colLiv2)		 scaffold31: 6825942-6826002 [-]
Precursor
(pre-Mir +30nt flank)
GCAGUUAAUGAAAAAGUGGAAUAUUCUGGGAGUUGUAGUCUUUCAAACAGAGCUUCGCAAGGACAUACCUGUAUUGGAACACUACAGCUCCCUGAACUUCCUCGCUUCACUGCCUAUGAAA
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Structure
        10           20        30        40         50         
GCAGUUAAUGAAAAAGU---|   UA   U            C      -    AGCUUCGC 
                    GGAA  UUC GGGAGUUGUAGU UUUCAA ACAG        A
                    CCUU  AAG CCCUCGACAUCA AAGGUU UGUC        A
AAAGUAUCCGUCACUUCGCU^   C-   U            C      A    CAUACAGG 
 .       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Li Mi Ov Pe Te To
Star sequence

Cli-Mir-1805_5p*
mirBase accessionMIMAT0038705
Sequence 
0- AGUUGUAGUCUUUCAAACAGA -21
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Mature sequence

Cli-Mir-1805_3p
mirBase accessionMIMAT0038706
Sequence 
39- UGUAUUGGAACACUACAGCUCC -61
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