| MirGeneDB ID | Cli-Mir-9631 |
|---|
| Family name |
MIR-9631 (all species) |
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| Seed |
AGCCAGG |
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| Species |
Rock pigeon (Columba livia) |
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| MiRBase ID |
cli-mir-9631
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. livia
|
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| Node of Origin (family) |
C. livia
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Genome context
(colLiv2) |
scaffold87: 2262197-2262257 [+]
|
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Precursor
(pre-Mir +30nt flank) |
AGAGGGGAAUGUGUUCAAAGGCACAGAUGAUAGCCAGGUGCCUCAUCUCAUGCCUGUGGAAAAACCUGUGUGAGAGGAGUGUCUGACUGUUUUCUGUGCCUUUGCGAUCUCACUGGGCUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGAGGGGAAUGUGUUCA--| U C UG CU A CUGUGG
AAGGCACAGA GAUAG CAGG C C UCUCAUGC A
UUCCGUGUCU UUGUC GUCU G G AGAGUGUG A
UCUCGGGUCACUCUAGCGU^ U A GU AG - UCCAAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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|
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| Mature sequence |
Cli-Mir-9631_5p |
| mirBase accession | MIMAT0038753 |
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| Sequence |
0- UAGCCAGGUGCCUCAUCUCAUGCC -24
Get sequence
|
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| Co-mature sequence |
Cli-Mir-9631_3p |
| mirBase accession | MIMAT0038754 |
|---|
| Sequence |
38- UGUGAGAGGAGUGUCUGACUGUU -61
Get sequence
|
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