| MirGeneDB ID | Cli-Mir-9634 |
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| Family name |
MIR-9634 (all species) |
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| Seed |
UUGUUCC |
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| Species |
Rock pigeon (Columba livia) |
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| MiRBase ID |
cli-mir-9634
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. livia
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| Node of Origin (family) |
C. livia
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Genome context
(colLiv2) |
scaffold38: 7984739-7984802 [-]
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Precursor
(pre-Mir +30nt flank) |
UAAUCGUCGUGACCUGUGGUGUCUAAAAAUCUUGUUCCCUAUGUUAAGGGAGCCUGUUUGUAAAUAGGGCAGGUCCCCUGCAUAAGGACAGUGUUUUUAUUCACACCCAAUGAACAAACACCUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UAAUCGUCGUGACCUGUG--| UC C U C UA AG UGUUUGUA
GUG UAAAAAU UUGU CC UAUGU AGGG CC \
CAC AUUUUUG GACA GG AUACG UCCC GG A
CUCCACAAACAAGUAACCCA^ UU U - A -- CU ACGGGAUA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), UGUG in loop |
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Tissue expression
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| Mature sequence |
Cli-Mir-9634_5p |
| mirBase accession | MIMAT0038761 |
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| Sequence |
0- CUUGUUCCCUAUGUUAAGGGAGCC -24
Get sequence
|
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| Co-mature sequence |
Cli-Mir-9634_3p |
| mirBase accession | MIMAT0038762 |
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| Sequence |
43- UCCCCUGCAUAAGGACAGUGU -64
Get sequence
|
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