MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-383-v1

Family name MIR-383 (all species)
Seed GAUCAGA
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-383
Paralogues Cpi-Mir-383-v2 
Orthologues Aca-Mir-383-v1  Ami-Mir-383-v1  Bta-Mir-383-v1  Cfa-Mir-383-v1  Cja-Mir-383-v1  Cli-Mir-383-v1  Cpo-Mir-383-v1  Dno-Mir-383-v1  Eca-Mir-383-v1  Ete-Mir-383-v1  Gga-Mir-383-v1  Gja-Mir-383-v1  Hsa-Mir-383-v1  Laf-Mir-383-v1  Mdo-Mir-383-v1  Mml-Mir-383-v1  Mmr-Mir-383-v1  Mmu-Mir-383-v1  Mun-Mir-383  Oan-Mir-383-v1  Ocu-Mir-383-v1  Pab-Mir-383-v1  Pbv-Mir-383-v1  Rno-Mir-383-v1  Sha-Mir-383-v1  Spt-Mir-383  Tgu-Mir-383-v1  Xtr-Mir-383-v1 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(chrPic1)		 JH584449: 9765291-9765352 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v1)		 Mir-383-v2 JH584449: 9765290-9765352 [+] UCSC Ensembl
Mir-383-v1 JH584449: 9765291-9765352 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGAGAGAAUCACCAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGAGUAGAUAUUAAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUAGCCUUUUUACCUCA
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Structure
        10         20         30        40        50        60 
GUGAGAGAAUCACCAAGU-   C     C-| A      AA    A        UUGAGUAG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
ACUCCAUUUUUCCGAUCAU   A     AA^ A      CG    -        CGAAUUAU 
120       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-383-v1_5p
mirBase accessionMIMAT0037874
Sequence 
0- AGAUCAGAAGGUGAUUGUGGCU -22
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Star sequence

Cpi-Mir-383-v1_3p* (predicted)
mirBase accessionNone
Sequence 
41- CCACAGCACUGCCUGGUCAGA -62
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