MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-459

Family name MIR-459 (all species)
Seed CAGUAAC
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-459
Paralogues
Orthologues Ami-Mir-459  Bta-Mir-459  Cfa-Mir-459  Cja-Mir-459  Cli-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Eca-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Laf-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmr-Mir-459  Mmu-Mir-459  Mun-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pab-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2  Xtr-Mir-459 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(chrPic1)		 JH584746: 3055939-3055999 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AACUCACCAUCCUUUUACUGUUUCUUGUAAUCAGUAACAAGGAUUCAUCCUUGUGUAUAGUAAAUAACAGGGAGAAUCUUUGUCACUAAGUACAAUUAACAGCUAUUCAACACAUGAGAUG
Get precursor sequence
Structure
        10          20        30        40        50        60
AACUCACCAUCCUUUUA--|    UC     AUC   A          A      UGUAUA 
                   CUGUU  UUGUA   AGU ACAAGGAUUC UCCUUG      G
                   GACAA  AACAU   UCA UGUUUCUAAG AGGGAC      U
GUAGAGUACACAACUUAUC^    UU     GAA   C          -      AAUAAA 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-459_5p
mirBase accessionMIMAT0037892
Sequence 
0- UCAGUAACAAGGAUUCAUCCUUG -23
Get sequence
Co-mature sequence

Cpi-Mir-459_3p
mirBase accessionMIMAT0037893
Sequence 
39- GGGAGAAUCUUUGUCACUAAGU -61
Get sequence