MirGeneDB 2.1

MirGeneDB ID

Cpi-Mir-9581

Family name MIR-9581 (all species)
Seed ACGCCGA
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-9581
Paralogues
Orthologues
Node of Origin (locus) C. picta
Node of Origin (family) C. picta
Genome context
(chrPic1)
JH584390: 702199-702260 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUCCCCUCUGCAUUCGGGGCCAGCGCCUCGGCUGGCGUACGUUGGCGUUGCUCCAUUGAAGCCAGCAGCUACGCCGACGUGAGCCAGCUGAUGCUCUGGCCCUCGGCAUCUCACGCGUUGA
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Structure
        10          20        30        40        50        60
GAUCCCCUCUGCAUUCG--|      C  C         G           U  UCCAUUG 
                   GGGCCAG GC UCGGCUGGC UACGUUGGCGU GC       A
                   CCCGGUC CG AGUCGACCG GUGCAGCCGCA CG       A
AGUUGCGCACUCUACGGCU^      U  U         A           U  ACGACCG 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Te Te Te To
Star sequence

Cpi-Mir-9581_5p*

mirBase accessionMIMAT0037958
Sequence
0- GGCUGGCGUACGUUGGCGUUGC -22
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Mature sequence

Cpi-Mir-9581_3p

mirBase accessionMIMAT0037959
Sequence
40- UACGCCGACGUGAGCCAGCUGA -62
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