MirGeneDB 2.1

MirGeneDB ID

Cpi-Mir-9586

Family name MIR-9586 (all species)
Seed UGAUCCU
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-9586
Paralogues
Orthologues
Node of Origin (locus) C. picta
Node of Origin (family) C. picta
Genome context
(chrPic1)
JH584521: 616846-616904 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUAUGAAUGCAAUCAACAGAGACUUGGGCCUUGAUCCUGCCAUGAUCUCUGCAGAAACAAACCCUUGUGGAGCUCAUUGCAGGACUGGGACCUUAGUUUUCAAGUUCUUCCACUGUUGC
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Structure
        10         20         30        40        50         
AUAUGAAUGCAAUCAACA-      U   -|  UGA      C    U   UG  GAAAC 
                   GAGACU GGG CCU   UCCUGC AUGA CUC  CA     A
                   UUUUGA UCC GGG   AGGACG UACU GAG  GU     A
CGUUGUCACCUUCUUGAAC      U   A^  UC-      U    C   GU  UCCCA 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Te Te Te To
Mature sequence

Cpi-Mir-9586_5p

mirBase accessionMIMAT0037968
Sequence
0- UUGAUCCUGCCAUGAUCUCUGCA -23
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Co-mature sequence

Cpi-Mir-9586_3p

mirBase accessionMIMAT0037969
Sequence
37- UGGAGCUCAUUGCAGGACUGGG -59
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