| MirGeneDB ID | Cpi-Mir-9586 |
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| Family name |
MIR-9586 (all species) |
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| Seed |
UGAUCCU |
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| Species |
Western painted turtle (Chrysemys picta bellii) |
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| MiRBase ID |
cpi-mir-9586
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. picta
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| Node of Origin (family) |
C. picta
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Genome context
(chrPic1) |
JH584521: 616846-616904 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUAUGAAUGCAAUCAACAGAGACUUGGGCCUUGAUCCUGCCAUGAUCUCUGCAGAAACAAACCCUUGUGGAGCUCAUUGCAGGACUGGGACCUUAGUUUUCAAGUUCUUCCACUGUUGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUAUGAAUGCAAUCAACA- U -| UGA C U UG GAAAC
GAGACU GGG CCU UCCUGC AUGA CUC CA A
UUUUGA UCC GGG AGGACG UACU GAG GU A
CGUUGUCACCUUCUUGAAC U A^ UC- U C GU UCCCA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Cpi-Mir-9586_5p |
| mirBase accession | MIMAT0037968 |
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| Sequence |
0- UUGAUCCUGCCAUGAUCUCUGCA -23
Get sequence
|
|---|
| Co-mature sequence |
Cpi-Mir-9586_3p |
| mirBase accession | MIMAT0037969 |
|---|
| Sequence |
37- UGGAGCUCAUUGCAGGACUGGG -59
Get sequence
|
|---|
