| MirGeneDB ID | Cpo-Mir-12081 |
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| Family name |
MIR-12081 (all species) |
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| Seed |
GAGCUAA |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-12081
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. porcellus
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| Node of Origin (family) |
C. porcellus
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Genome context
(cavPor3) |
scaffold_25: 8798446-8798504 [-]
UCSC
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Precursor
(pre-Mir +30nt flank) |
AGAUCAUAUCUCAAAAAGACAAAAAAAUAAGGGCCAGGGAUUUAGCUCACUGGCAUAAGUGGCAUAAGUGAGCUAAAUGCCUGGCAAGCAUGAGGUCAUGAGUUCGAUCCCCAGUACCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGAUCAUAUCUCAAAAA-----| AAAAAAAUAAGG G GGCAUAA
GAC GCCAGG AUUUAGCUCACU \
CUG CGGUCC UAAAUCGAGUGA G
CCCAUGACCCCUAGCUUGAGUA^ GAGUACGAA--- G AUACGGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
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| Star sequence |
Cpo-Mir-12081_5p* |
| mirBase accession | MIMAT0047465 |
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| Sequence |
0- GGGCCAGGGAUUUAGCUCACU -21
Get sequence
|
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| Mature sequence |
Cpo-Mir-12081_3p |
| mirBase accession | MIMAT0047466 |
|---|
| Sequence |
38- UGAGCUAAAUGCCUGGCAAGC -59
Get sequence
|
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