MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-1296

Family name MIR-1296 (all species)
Seed UAGGGCC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-1296
Paralogues
Orthologues Bta-Mir-1296  Cfa-Mir-1296  Dno-Mir-1296  Ete-Mir-1296  Hsa-Mir-1296  Mml-Mir-1296  Ocu-Mir-1296 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_15: 13768767-13768831 [-] UCSC
Precursor
(pre-Mir +30nt flank)
UGAAAUCAACGAAGCACCCACCUAACUGGGUUAGGGCCCUGGCUCCAUCUCCUUUAGGAAAACCUUCUGUGGGGAGUGGGGCUUUGACCCUAACCCAGCUGGGCUGUAAUACUGCUGCAUUUUCU
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Structure
        10         20         30        40        50        60  
UGAAAUCAACGAAGCACC-  -|   A           CCCU       U    UUUAGGAAA 
                   CA CCUA CUGGGUUAGGG    GGCUCCA CUCC         A
                   GU GGGU GACCCAAUCCC    UCGGGGU GAGG         C
UCUUUUACGUCGUCAUAAU  C^   C           AGUU       -    GGUGUCUUC 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cpo-Mir-1296_5p
mirBase accessionMIMAT0047415
Sequence 
0- UUAGGGCCCUGGCUCCAUCUCC -22
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Star sequence

Cpo-Mir-1296_3p*
mirBase accessionMIMAT0047416
Sequence 
44- AGUGGGGCUUUGACCCUAACC -65
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