MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-506-o7b

Family name MIR-506 (all species)
Seed ACCAAGA
Species Guinea pig (Cavia porcellus)
MiRBase ID
Paralogues Cpo-Mir-506-o1  Cpo-Mir-506-o2  Cpo-Mir-506-o3  Cpo-Mir-506-o4  Cpo-Mir-506-o5  Cpo-Mir-506-o6  Cpo-Mir-506-o7a  Cpo-Mir-506-o7c  Cpo-Mir-506-o8  Cpo-Mir-506-P1  Cpo-Mir-506-P2a  Cpo-Mir-506-P2b  Cpo-Mir-506-P2c  Cpo-Mir-506-P6 
Orthologues Cfa-Mir-506-P7  Hsa-Mir-506-P7b  Mmu-Mir-506-P7  Rno-Mir-506-P7 
Node of Origin (locus) C. porcellus
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_84: 3932651-3932706 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-506-o7b)		 Mir-506-o7a scaffold_84: 3931993-3932049 [+] UCSC
Mir-506-o7c scaffold_84: 3933561-3933617 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GAGAGCACCUGCGCGCUGUGUGCUGUGCCUUACUCAGAGUAGCAUUGGUUACUUAGACUAUAGUCACCAAGACCUCUCUGAGUAGAGUAAAGCUCACUAUUUCCCUUGCUUUUAGU
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Structure
        10          20        30        40         50       
GAGAGCACCUGCGCGCU--|  U   G   C          U  CA-     U  UUAG 
                   GUG GCU UGC UUACUCAGAG AG   UUGGU AC    A
                   CAC CGA AUG GAUGAGUCUC UC   AACCA UG    C
UGAUUUUCGUUCCCUUUAU^  U   A   A          -  CAG     C  AUAU 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Cpo-Mir-506-o7b_5p* (predicted)
mirBase accessionNone
Sequence 
0- UACUCAGAGUAGCAUUGGUUAC -22
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Mature sequence

Cpo-Mir-506-o7b_3p
mirBase accessionNone
Sequence 
34- CACCAAGACCUCUCUGAGUAGA -56
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