| MirGeneDB ID | Cpo-Mir-760 |
|---|
| Family name |
MIR-760 (all species) |
|---|
| Seed |
GGCUCUG |
|---|
| Species |
Guinea pig (Cavia porcellus) |
|---|
| MiRBase ID |
cpo-mir-760
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-760
Cja-Mir-760
Dno-Mir-760
Eca-Mir-760
Ete-Mir-760
Hsa-Mir-760
Laf-Mir-760
Mml-Mir-760
Mmr-Mir-760
Mmu-Mir-760
Ocu-Mir-760
Pab-Mir-760
Rno-Mir-760
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(cavPor3) |
scaffold_2: 19580894-19580951 [+]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGGUGAGGCCGCGGCGCAGGGUACGGCGCCCCCCUCAGUCUGCCAGAGCCCGGAUGCCUCAGAAAUUCGGCUCUGGGUCUGUGGGGGACGAAAUGCAACCCAGUCUCCAUUUUCCUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGGUGAGGCCGCGGCGCAGG--| CGG C U U UG C UGCCU
GUA CG CCCCC CAG C CCAGAGCC GGA \
CGU GC GGGGG GUC G GGUCUCGG CUU C
AGUCCUUUUACCUCUGACCCAA^ AAA A U U -- - AAAGA
110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
| |
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Cpo-Mir-760_5p* (predicted) |
| mirBase accession | MIMAT0047383 |
|---|
| Sequence |
0- CCCCUCAGUCUGCCAGAGCCCGGA -24
Get sequence
|
|---|
| Mature sequence |
Cpo-Mir-760_3p (predicted) |
| mirBase accession | MIMAT0047384 |
|---|
| Sequence |
37- CGGCUCUGGGUCUGUGGGGGA -58
Get sequence
|
|---|
