MirGeneDB 2.1

MirGeneDB ID

Csc-Mir-153-P17b

Family name MIR-153 (all species)
Seed UGCAUAG
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-153-P16  Csc-Mir-153-P17a 
Orthologues Asu-Mir-153  Bfl-Mir-153  Bge-Mir-153-P17  Bla-Mir-153  Bpl-Mir-153  Cgi-Mir-153  Cin-Mir-153  Cte-Mir-153  Dma-Mir-153  Dpu-Mir-153  Isc-Mir-153  Lan-Mir-153  Lgi-Mir-153  Npo-Mir-153  Obi-Mir-153  Ovu-Mir-153  Pfl-Mir-153  Pmi-Mir-153  Sko-Mir-153  Sme-Mir-153  Spu-Mir-153  Xbo-Mir-153 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)
NW_019385909.1: 125554-125611 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAAAAAAGGCAUUUACCUAAUCAUACUUAUCAUUUUUGUGAUUGGUGCAAUUGUAUUUCAACAAGUUGCAUAGUCAUAAAAAUGAUGGGUGUGUUCUGGUUUAUCAUCUAGAUCAUC
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Structure
        10         20         30        40        50         
GAAAAAAAGGCAUUUAC-   AU-|                      G       GUAUU 
                  CUA   CAUACUUAUCAUUUUUGUGAUUG UGCAAUU     \
                  GGU   GUGUGGGUAGUAAAAAUACUGAU ACGUUGA     U
CUACUAGAUCUACUAUUU   CUU^                      -       ACAAC 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-153-P17b_5p*

mirBase accessionNone
Sequence
0- UCAUUUUUGUGAUUGGUGCAAUU -23
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Mature sequence

Csc-Mir-153-P17b_3p

mirBase accessionNone
Sequence
36- UUGCAUAGUCAUAAAAAUGAUG -58
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