MirGeneDB 2.1
MirGeneDB ID

Csc-Mir-252-P1

Family name MIR-252 (all species)
Seed AAGUAGU
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-252-P2 
Orthologues Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Cgi-Mir-252-P1  Cte-Mir-252-P1  Dan-Mir-252-P1a  Dan-Mir-252-P1b  Dma-Mir-252-P1-v1  Dma-Mir-252-P1-v2  Dme-Mir-252-P1a  Dme-Mir-252-P1b  Dmo-Mir-252-P1a  Dmo-Mir-252-P1b  Dpu-Mir-252-P1  Dsi-Mir-252-P1a  Dsi-Mir-252-P1b  Dya-Mir-252-P1a  Dya-Mir-252-P1b  Esc-Mir-252-P1  Hme-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Lpo-Mir-252-P1c  Lpo-Mir-252-P1e  Lpo-Mir-252-P1f  Npo-Mir-252-P1  Obi-Mir-252-P1  Ovu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Sko-Mir-252-P1  Spu-Mir-252-P1  Tca-Mir-252-P1  Xbo-Mir-252-P1g  Xbo-Mir-252-P1h  Xbo-Mir-252-P1i 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)		 NW_019384632.1: 328042-328098 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUAUGUAGGUGAACAUGACAAUCUGGAUGCUAAGUAGUAGUGCCGCAGGUAAUAUUUUCAUACUUACUUGCACACGACUGCUUAAUAUUUAGUUUGUCGCAUCAUCUAAACAUAGAA
Get precursor sequence
Structure
        10           20        30        40        50        
CUAUGUAGGUGAACAUG---|   U       C        A   CC        UAUUU 
                    ACAA CUGGAUG UAAGUAGU GUG  GCAGGUAA     \
                    UGUU GAUUUAU AUUCGUCA CAC  CGUUCAUU     U
AAGAUACAAAUCUACUACGC^   U       A        G   A-        CAUAC 
     110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-252-P1_5p
mirBase accessionNone
Sequence 
0- UAAGUAGUAGUGCCGCAGGUAA -22
Get sequence
Star sequence

Csc-Mir-252-P1_3p*
mirBase accessionNone
Sequence 
35- ACUUGCACACGACUGCUUAAUA -57
Get sequence