MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-330-v1

Family name MIR-330 (all species)
Seed AAAGCAC
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-330
Paralogues Dno-Mir-330-v2 
Orthologues Bta-Mir-330-v1  Cfa-Mir-330  Cja-Mir-330-v1  Cpo-Mir-330-v1  Eca-Mir-330-v1  Ete-Mir-330-v1  Hsa-Mir-330-v1  Laf-Mir-330  Mml-Mir-330-v1  Mmr-Mir-330-v1  Mmu-Mir-330-v1  Ocu-Mir-330-v1  Pab-Mir-330-v1  Rno-Mir-330-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)		 JH580665: 363522-363585 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-330-v1)		 Mir-330-v1 JH580665: 363522-363585 [+] UCSC Ensembl
Mir-330-v2 JH580665: 363522-363585 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUGCUGUGUGAUCUUGGGCGAUCACUGCCUCUCUGGGCCUGUGUCUUAGGCUCUGCAAGAUCAACCGAGCAAAGCACACGGCCUGCAGAGAGCCAGCGCUGCGCUCCUAGCGGCCCGCGGGGC
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Structure
        10         20         30          40         50        60 
CGUGCUGUGUGAUCUUG-    AUCA-   C       --    -|   U   AG   CUGCAAG 
                  GGCG     CUG CUCUCUG  GGCC UGUG CUU  GCU       \
                  UCGC     GAC GAGAGAC  CCGG ACAC GAA  CGA       A
CGGGGCGCCCGGCGAUCC    GUCGC   C       GU    C^   -   A-   GCCAACU 
  120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Dno-Mir-330-v1_5p* (predicted)
mirBase accessionMIMAT0047811
Sequence 
0- UCUCUGGGCCUGUGUCUUAGGCU -23
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Mature sequence

Dno-Mir-330-v1_3p
mirBase accessionMIMAT0047812
Sequence 
40- CAAAGCACACGGCCUGCAGAGAGC -64
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