MirGeneDB 3.0

MirGeneDB ID

Dno-Mir-488

Family name MIR-488 (all species)
Seed UGAAAGG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-488
Paralogues
Orthologues Bta-Mir-488  Cfa-Mir-488  Cja-Mir-488  Eca-Mir-488  Ete-Mir-488  Hsa-Mir-488  Laf-Mir-488  Mml-Mir-488  Mmr-Mir-488  Mmu-Mir-488  Ocu-Mir-488  Pab-Mir-488  Rno-Mir-488 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH577154: 49226-49284 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAGAGUGGAACAUUUUAGAGAAUCAUCUCUCCCAGAUAAUGGCGCUCUCAAACAAGUUUCCAAGUUGUUUGAAAGGCUAUUUCUUGGUCAGAAGACUCUCAAUUCCUUCUGGAAGCCUC
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Structure
        10          20        30        40        50          
UAGAGUGGAACAUUUUA--|   A  A   CU  C   U      G  C      AAGUUU 
                   GAGA UC UCU  CC AGA AAUGGC CU UCAAAC      \
                   CUCU AG AGA  GG UCU UUAUCG GA AGUUUG      C
CUCCGAAGGUCUUCCUUAA^   C  A   CU  U   -      -  A      UUGAAC 
       110       100        90         80         70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-488_5p*

mirBase accessionMIMAT0047918
Sequence
0- CCCAGAUAAUGGCGCUCUCAAAC -23
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Mature sequence

Dno-Mir-488_3p

mirBase accessionMIMAT0047919
Sequence
38- UUGAAAGGCUAUUUCUUGGUC -59
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