MirGeneDB ID | Dno-Mir-506-P1 |
Family name |
MIR-506 (all species) |
Seed |
ACUCAGG |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-506
|
Paralogues |
Dno-Mir-506-P2
Dno-Mir-506-P3
Dno-Mir-506-P7f
Dno-Mir-506-P7g
Dno-Mir-506-P7h
Dno-Mir-506-P7i
|
Orthologues |
Bta-Mir-506-P1
Cfa-Mir-506-P1
Cpo-Mir-506-o1
Cpo-Mir-506-P1
Hsa-Mir-506-P1
Mml-Mir-506-P1
Mmu-Mir-506-P1
Ocu-Mir-506-P1
Rno-Mir-506-P1
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
JH571138: 1950414-1950474 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCAUCUUUAGCCACUCUGUGUGCAGUGCCCUACUCAGGAAGGUUCAGUUAAGUAUUUAGACUAUAAUAUUAACCGCACCCUUCUGAGUAGAGUAAUGCUCAACUAUGACGCCAUUUGGGGG
Get precursor sequence
|
Structure | 10 20 30 40 50
CCAUCUUUAGCCACUCUG--| U G C A UCA GUAUUUAG
UG GCA UGC CUACUCAGGA GGU GUUAA \
AC CGU AUG GAUGAGUCUU CCA CAAUU A
GGGGGUUUACCGCAGUAUCA^ U A A C CGC AUAAUAUC
. 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dno-Mir-506-P1_5p (predicted) |
mirBase accession | MIMAT0047950 |
Sequence |
0- UACUCAGGAAGGUUCAGUUAAGU -23
Get sequence
|
Co-mature sequence |
Dno-Mir-506-P1_3p (predicted) |
mirBase accession | MIMAT0047951 |
Sequence |
38- UUAACCGCACCCUUCUGAGUAGA -61
Get sequence
|