MirGeneDB 3.0
MirGeneDB ID

Dsi-Mir-956-v2

Family name MIR-956 (all species)
Seed UCGAGAC
Species Fruit fly (Drosophila simulans)
MiRBase ID
Paralogues Dsi-Mir-956-v1 
Orthologues Dan-Mir-956-v2  Dme-Mir-956-v2  Dmo-Mir-956-v2  Dya-Mir-956-v2  Gpa-Mir-956-v2 
Node of Origin (locus) Glossinidae + Drosophilidae
Node of Origin (family) Glossinidae + Drosophilidae
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 3L: 11468691-11468819 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGAUAUGUGCUCUUUUCCUGAUCGUUAUCGUGUUUGGAAUGGUCUCGUUAGCUAACGGAUGAGCAAGUGCUCGGCUCACUGGCCCAAAUGCAGUUUGCCCGGAGACGCCGGUUGCCCAAGCACUGAAAUGUGUAGUUUCGAGACCACUCUAAUCCAUUGCAGCAUUUUCCACAAUAUGCAAAUUCAUC
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Structure
        10        20         30         40        50        60        70        80        90    
UUGAUAUGUGCUCUUUUCCUGAUC-   AUC   U-|    A        UU   UAACGGAUGAGCAAGUGCUCGGCUCACUGGCCCAAAUGCA 
                         GUU   GUG  UUGGA UGGUCUCG  AGC                                        G
                         CGA   UAC  AAUCU ACCAGAGC  UUG                                        U
CUACUUAAACGUAUAACACCUUUUA   CGU   CU^    C        U-   AUGUGUAAAGUCACGAACCCGUUGGCCGCAGAGGCCCGUU 
       180       170       160       150       140        130       120       110       100
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
He Wh
Star sequence

Dsi-Mir-956-v2_5p*
mirBase accessionNone
Sequence 
0- GUGUUUGGAAUGGUCUCGUUAGC -23
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Mature sequence

Dsi-Mir-956-v2_3p
mirBase accessionNone
Sequence 
107- UUCGAGACCACUCUAAUCCAUU -129
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