| MirGeneDB ID | Esc-Novel-32 |
|---|
| Family name |
COL-NOVEL-32 (all species) |
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| Seed |
UGUUGAC |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Obi-Novel-32
Ovu-Novel-32
|
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-32_pre_SRIE01022723.1:4934695-4934835: 41-101 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCGAGACCUGCACUAAUAUAUCGUCUGAACCGAUGGAUUUGUUACGUGACUCGAUGGUAUAUUGCGACAUUGUUGACGUAACACCAUUGCCCAGAGAUAUAUCAUCUCACAUGUCUGGGGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCGAGACCUGCACUAAU----| G AAC AUU GACU GGUAUA
AUAUC UCUG CGAUGG UGUUACGU CGAU \
UAUAG AGAC GUUACC ACAAUGCA GUUA U
GGGGGUCUGUACACUCUACUA^ - CC- --- GUU- CAGCGU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Esc-Novel-32_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGAUGGAUUUGUUACGUGACUCGAU -25
Get sequence
|
|---|
| Mature sequence |
Esc-Novel-32_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UUGUUGACGUAACACCAUUGCC -61
Get sequence
|
|---|
