| MirGeneDB ID | Esc-Novel-69 |
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| Family name |
ESC-NOVEL-69 (all species) |
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| Seed |
AUCUCGA |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. scolopes
|
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| Node of Origin (family) |
E. scolopes
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-69_pre_SRIE01037504.1:88869-89014: 46-101 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUAUAUUCCAUACUUUUGAGUCUUACACCUGAUCUCGAUGAGGUUUGAUCCAUAGGAUCCAUAGGAUCGGACCACGUCGAGAGCAAGUGUGAGAUGUUGCCCACAUCGAGAGCAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUAUAUUCCAUACUUUUGA--| C A A AUAGG
GUCUUACAC UG UCUCGAUG GGUUUGAUCC A
UAGAGUGUG AC AGAGCUGC CCAGGCUAGG U
GGACGAGAGCUACACCCGUUG^ A G A AUACC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Esc-Novel-69_5p |
| mirBase accession | None |
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| Sequence |
0- GAUCUCGAUGAGGUUUGAUCC -21
Get sequence
|
|---|
| Co-mature sequence |
Esc-Novel-69_3p |
| mirBase accession | None |
|---|
| Sequence |
35- AUCGGACCACGUCGAGAGCAA -56
Get sequence
|
|---|
