MirGeneDB 2.1
MirGeneDB ID

Gja-Mir-192-P1

Family name MIR-192 (all species)
Seed UGACCUA
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-192-P2 
Orthologues Aca-Mir-192-P1  Ami-Mir-192-P1  Bta-Mir-192-P1  Cfa-Mir-192-P1  Cli-Mir-192-P1  Cmi-Mir-192-P1  Cpi-Mir-192-P1  Cpo-Mir-192-P1  Dno-Mir-192-P1  Ebu-Mir-192-o1  Ete-Mir-192-P1  Gga-Mir-192-P1  Hsa-Mir-192-P1  Lch-Mir-192-P1  Mdo-Mir-192-P1  Mml-Mir-192-P1  Mmu-Mir-192-P1  Mun-Mir-192-P1  Oan-Mir-192-P1  Oan-Mir-192-P1-as  Ocu-Mir-192-P1  Pbv-Mir-192-P1  Pma-Mir-192-o1  Rno-Mir-192-P1  Spt-Mir-192-P1  Sto-Mir-192-P1  Tgu-Mir-192-P1  Xla-Mir-192-P1a  Xla-Mir-192-P1b  Xtr-Mir-192-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015175360.1: 821581-821641 [+]
Precursor
(pre-Mir +30nt flank)
CAUUUCUGUUCAAACUUGAGGUCCAGGGUAAUGACCUAUGAUUUGACAGACUGUGCUUUCUAAGUUUGUCUGUCAUUUCUGUAGGCCAAUACACUGCAUACUUUCAUCACUACAUUGCAUA
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Structure
        10         20         30         40        50         
CAUUUCUGUUCAAACUU-   GUC-   G   A  A     -| UU        UGUGCUU 
                  GAG    CAG GUA UG CCUAU GA  UGACAGAC       U
                  UUC    GUC CAU AC GGAUG CU  ACUGUCUG       C
AUACGUUACAUCACUACU   AUAC   A   A  C     U^ UU        UUUGAAU 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Gja-Mir-192-P1_5p
mirBase accessionNone
Sequence 
0- AUGACCUAUGAUUUGACAGACU -22
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Star sequence

Gja-Mir-192-P1_3p* (predicted)
mirBase accessionNone
Sequence 
38- UCUGUCAUUUCUGUAGGCCAAUA -61
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