MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-28-P1

Family name MIR-28 (all species)
Seed AGGAGCU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-28
Paralogues Hsa-Mir-28-P2  Hsa-Mir-28-P3 
Orthologues Bta-Mir-28-P1  Cfa-Mir-28-P1  Cpo-Mir-28-P1  Dno-Mir-28-P1  Ete-Mir-28-P1  Mml-Mir-28-P1  Mmu-Mir-28-P1  Ocu-Mir-28-P1  Rno-Mir-28-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr3: 188688794-188688855 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAAAAAAUUUAAAAUGGUCCUUGCCCUCAAGGAGCUCACAGUCUAUUGAGUUACCUUUCUGACUUUCCCACUAGAUUGUGAGCUCCUGGAGGGCAGGCACUUUCGUUCAUCUGAAAAAGA
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Structure
        10          20        30        40        50        60
AAGAAAAAAUUUAAAAU--|  C         A                U  AGUUACCUU 
                   GGU CUUGCCCUC AGGAGCUCACAGUCUA UG         U
                   UCA GGACGGGAG UCCUCGAGUGUUAGAU AC         C
AGAAAAAGUCUACUUGCUU^  C         G                C  CCUUUCAGU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Mature sequence

Hsa-Mir-28-P1_5p

mirBase accessionMIMAT0000085
Sequence
0- AAGGAGCUCACAGUCUAUUGAG -22
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Proposed targets microrna.org: MIMAT0000085
TargetScanVert: hsa-miR-28-5p
TargetMiner: hsa-miR-28-5p
miRDB: MIMAT0000085
Co-mature sequence

Hsa-Mir-28-P1_3p

mirBase accessionMIMAT0004502
Sequence
40- CACUAGAUUGUGAGCUCCUGGA -62
Get sequence
Proposed targets microrna.org: MIMAT0004502
TargetScanVert: hsa-miR-28-3p
TargetMiner: hsa-miR-28-3p
miRDB: MIMAT0004502