MirGeneDB 2.1
MirGeneDB ID

Hsa-Mir-28-P3

Family name MIR-28 (all species)
Seed AGGAGCU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-708
Paralogues Hsa-Mir-28-P1  Hsa-Mir-28-P2 
Orthologues Bta-Mir-28-P3  Cfa-Mir-28-P3  Cpo-Mir-28-P3  Dno-Mir-28-P3  Ete-Mir-28-P3  Mml-Mir-28-P3  Mmu-Mir-28-P3  Ocu-Mir-28-P3  Rno-Mir-28-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)		 chr11: 79402031-79402099 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-28-P3)		 Mir-28-P3 chr11: 79402031-79402099 [-] UCSC Ensembl
Mir-5579 chr11: 79422169-79422226 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGCUGUGUGUGAAAUGGUAACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUAAAUGACUUGCACAUGAACACAACUAGACUGUGAGCUUCUAGAGGGCAGGGACCUUACCCUAGUCAUCUCUCU
Get precursor sequence
Structure
        10          20        30        40        50        60    
ACUGCUGUGUGUGAAAU--|  AA        A           A     C  GGGGUAAAUGAC 
                   GGU  CUGCCCUC AGGAGCUUACA UCUAG UG            \
                   CCA  GACGGGAG UCUUCGAGUGU AGAUC AC            U
UCUCUCUACUGAUCCCAUU^  GG        A           C     A  ACAAGUACACGU 
       120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Mature sequence

Hsa-Mir-28-P3_5p
mirBase accessionMIMAT0004926
Sequence 
0- AAGGAGCUUACAAUCUAGCUGGG -23
Get sequence
Proposed targets microrna.org: MIMAT0004926
TargetScanVert: hsa-miR-708-5p
TargetMiner: hsa-miR-708-5p
miRDB: MIMAT0004926
Star sequence

Hsa-Mir-28-P3_3p*
mirBase accessionMIMAT0004927
Sequence 
46- CAACUAGACUGUGAGCUUCUAGA -69
Get sequence
Proposed targets microrna.org: MIMAT0004927
TargetScanVert: hsa-miR-708-3p
TargetMiner: hsa-miR-708-3p
miRDB: MIMAT0004927