MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-3200

Family name MIR-3200 (all species)
Seed ACCUUGC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-3200
Paralogues
Orthologues Mml-Mir-3200 
Node of Origin (locus) Catarrhini
Node of Origin (family) Catarrhini
Genome context
(hg38)
chr22: 30731569-30731632 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGAGAGACAAAGAAGGAGGUGGUCGAGGGAAUCUGAGAAGGCGCACAAGGUUUGUGUCCAAUACAGUCCACACCUUGCGCUACUCAGGUCUGCUCGUGCCCUCCCAUGAUAUCAGCUCUCCUA
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Structure
        10         20           30        40        50        60  
GAGAGAGACAAAGAAGGA-  U-   -    -|  A      AA      CA    UUGUGUCCA 
                   GG  GGU CGAG GGA UCUGAG  GGCGCA  AGGU         A
                   CC  CCG GCUC UCU GGACUC  UCGCGU  UCCA         U
AUCCUCUCGACUAUAGUAC  UC   U    G^  -      A-      --    CACCUGACA 
  120       110       100        90          80          70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Star sequence

Hsa-Mir-3200_5p*

mirBase accessionMIMAT0017392
Sequence
0- AAUCUGAGAAGGCGCACAAGGUU -23
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Proposed targets TargetScanVert: hsa-miR-3200-5p
TargetMiner: hsa-miR-3200-5p
miRDB: MIMAT0017392
Mature sequence

Hsa-Mir-3200_3p

mirBase accessionMIMAT0015085
Sequence
41- CACCUUGCGCUACUCAGGUCUGC -64
Get sequence
Proposed targets microrna.org: MIMAT0015085
TargetScanVert: hsa-miR-3200-3p
TargetMiner: hsa-miR-3200-3p
miRDB: MIMAT0015085