MirGeneDB 2.1
MirGeneDB ID

Hsa-Mir-5683

Family name MIR-5683 (all species)
Seed ACAGAUG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-5683
Paralogues
Orthologues
Node of Origin (locus) H. sapiens
Node of Origin (family) H. sapiens
Genome context
(hg38)		 chr6: 6169343-6169402 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCAGCACCAUCAUCACCUGGGAGCUUGUUACAGAUGCAGAUUCUCUGACUUCUUACUGCACCAGUGAAGUCAGGAUCUGCAUUUGAAUAAGACCCCAGACAAUGCCUAUUGAAGUGUG
Get precursor sequence
Structure
        10          20        30        40        50        60 
CAGCAGCACCAUCAUCAC--|    AG      A           U U        UUACUG 
                    CUGGG  CUUGUU CAGAUGCAGAU C CUGACUUC      \
                    GACCC  GAAUAA GUUUACGUCUA G GACUGAAG      C
GUGUGAAGUUAUCCGUAACA^    CA      -           - -        UGACCA 
.       110       100        90         80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Mature sequence

Hsa-Mir-5683_5p
mirBase accessionMIMAT0022472
Sequence 
0- UACAGAUGCAGAUUCUCUGACUUC -24
Get sequence
Proposed targets TargetScanVert: hsa-miR-5683
TargetMiner: hsa-miR-5683
miRDB: MIMAT0022472
Star sequence

Hsa-Mir-5683_3p*
mirBase accessionNone
Sequence 
39- AGUCAGGAUCUGCAUUUGAAU -60
Get sequence