MirGeneDB ID | Hsa-Novel-2 |
Family name |
CAT-NOVEL-2 (all species) |
Seed |
AUAAACU |
Species |
Human (Homo sapiens) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Mml-Novel-2
|
Node of Origin (locus) |
Catarrhini
|
Node of Origin (family) |
Catarrhini
|
Genome context (hg38) |
chr4: 75973882-75973940 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGCAUGCAGUUAGAAGUAAGCAUCACUCAGCAUAAACUGCAUGCCUGCACACCAGGCAUGCAGUGAUGUGCAGGCAUGCAGUUUAUGUUAAGUGAUGCUUUCUUUGUUCCUAUACUGCU
Get precursor sequence
|
Structure | 10 20 30 40 50
GGCAUGCAGUUAGAAGU--| C C AGGCA
AAGCAUCACU AGCAUAAACUGCAUGCCUGCACA C \
UUCGUAGUGA UUGUAUUUGACGUACGGACGUGU G U
UCGUCAUAUCCUUGUUUCU^ A A UGACG
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
3- |
3- |
3- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
5- |
5- |
5- |
5- |
5- |
5- |
5- |
6- |
6- |
6- |
6- |
6- |
|
|
|
Mature sequence |
Hsa-Novel-2_5p |
mirBase accession | None |
Sequence |
0- CAUAAACUGCAUGCCUGCACACC -23
Get sequence
|
Co-mature sequence |
Hsa-Novel-2_3p |
mirBase accession | None |
Sequence |
36- UGUGCAGGCAUGCAGUUUAUGUU -59
Get sequence
|