| MirGeneDB ID | Lan-Novel-1 |
|---|
| Family name |
LAN-NOVEL-1 (all species) |
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| Seed |
UAGCUAU |
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| Species |
Lingula (Lingula anatina) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
L. anatina
|
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| Node of Origin (family) |
L. anatina
|
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Genome context
(LinAna_1.0) |
LFEI01000048: 697223-697278 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACAUUUGCUUAUGUGUUCCAGCAUUCACAUGUAGCUAUCAAAUAUGUGUGCAUAUAUUUGAUUGCACACAUACUUAGUAGCUAGAUGGGGGUACUGCCUAUAUCUCCAUGGUAGCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACAUUUGCUUAUGUGUUC--| C A G C A UAUA
CAG AUUC CAU UAGCUAU AA UAUGUGUGCA U
GUC UGGG GUA AUCGAUG UU AUACACACGU U
CCGAUGGUACCUCUAUAUCC^ A G G A C UAGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Lan-Novel-1_5p |
| mirBase accession | None |
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| Sequence |
0- GUAGCUAUCAAAUAUGUGUGCA -22
Get sequence
|
|---|
| Star sequence |
Lan-Novel-1_3p* |
| mirBase accession | None |
|---|
| Sequence |
34- CACACAUACUUAGUAGCUAGAU -56
Get sequence
|
|---|
