MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-26-P4

Family name MIR-26 (all species)
Seed UCAAGUA
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-26-P1  Loc-Mir-26-P2 
Orthologues Aca-Mir-26-P4  Ami-Mir-26-P4  Bta-Mir-26-P4  Cfa-Mir-26-P4  Cja-Mir-26-P4  Cpi-Mir-26-P4  Cpo-Mir-26-P4  Dno-Mir-26-P4  Dre-Mir-26-P4  Eca-Mir-26-P4  Ete-Mir-26-P4  Gga-Mir-26-P4  Gja-Mir-26-P4  Gmo-Mir-26-P4  Hsa-Mir-26-P4  Laf-Mir-26-P4  Lch-Mir-26-P4  Mal-Mir-26-P4  Mdo-Mir-26-P4  Mml-Mir-26-P4  Mmr-Mir-26-P4  Mmu-Mir-26-P4  Mun-Mir-26-P4  Neu-Mir-26-P4  Oan-Mir-26-P4  Ocu-Mir-26-P4  Pab-Mir-26-P4  Pbv-Mir-26-P4  Pma-Mir-26-o4  Rno-Mir-26-P4  Sha-Mir-26-P4  Spt-Mir-26-P4  Sto-Mir-26-P4  Tgu-Mir-26-P4  Tni-Mir-26-P4  Xla-Mir-26-P4a  Xla-Mir-26-P4b  Xtr-Mir-26-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 AHAT01044445.1: 473-533 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGAACACUGGGAUCCCUAGCUGCUCCGUGGUUCAAGUAAUCCAGGAUAGGCUGGAUCCUGGCACUGCGGCCUAUUCUUGAUUACUUGUUUCAGGAGGCGGCUGCUGACGGCGGAGUCGAGA
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Structure
        10          20         30        40        50          
AGAACACUGGGAUCCCU--     -|   G   UU         C          GGAUCCU 
                   AGCUG CUCC UGG  CAAGUAAUC AGGAUAGGCU       \
                   UCGGC GAGG ACU  GUUCAUUAG UCUUAUCCGG       G
AGAGCUGAGGCGGCAGUCG     G^   -   UU         U          CGUCACG 
 .       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Mature sequence

Loc-Mir-26-P4_5p
mirBase accessionNone
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Loc-Mir-26-P4_3p*
mirBase accessionNone
Sequence 
39- CCUAUUCUUGAUUACUUGUUUC -61
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