| MirGeneDB ID | Loc-Mir-726 |
|---|
| Family name |
MIR-726 (all species) |
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| Seed |
UCACUAC |
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| Species |
Spotted gar (Lepisosteus oculatus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aca-Mir-726
Cpi-Mir-726
Dre-Mir-726
Gga-Mir-726
Gja-Mir-726
Mal-Mir-726
Spt-Mir-726
Tgu-Mir-726
Tni-Mir-726
Xla-Mir-726-P1
Xla-Mir-726-P2
Xtr-Mir-726
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| Node of Origin (locus) |
Osteichthyes
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| Node of Origin (family) |
Osteichthyes
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Genome context
(LepOcu1) |
LG1: 2615142-2615204 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCGCCUCAGCUGCCUUUCGGGGGCACGUCUGGAAUUCCGCUAGUUCUGAACUAUUCGGGGUUGGAAAAAAAGUUCACUACUAGCAGAACUCGGACUUGCACCCGGCUCUCCACGAGACGACCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCGCCUCAGCUGCCUUU--| G C AA C UC AUUCGGGG
CGGG GCA GUCUGG UUC GCUAGU UGAACU U
GCCC CGU CAGGCU AAG CGAUCA ACUUGA U
CCCAGCAGAGCACCUCUCG^ A U C- A UC AAAAAAGG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Br |
Br |
He |
He |
He |
He |
Ov |
Ov |
Ov |
Ov |
Te |
Te |
Te |
Te |
To |
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| Star sequence |
Loc-Mir-726_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GGAAUUCCGCUAGUUCUGAACU -22
Get sequence
|
|---|
| Mature sequence |
Loc-Mir-726_3p |
| mirBase accession | None |
|---|
| Sequence |
42- UUCACUACUAGCAGAACUCGG -63
Get sequence
|
|---|
