MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-281-P13

Family name MIR-281 (all species)
Seed AGAGAGC
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-281-P14  Lpo-Mir-281-P15  Lpo-Mir-281-P16  Lpo-Mir-281-P17 
Orthologues Aae-Mir-281  Asu-Mir-281  Bfl-Mir-281  Bge-Mir-281  Bla-Mir-281  Bpl-Mir-281  Cgi-Mir-281  Cin-Mir-281  Csc-Mir-281  Cte-Mir-281  Dma-Mir-281  Dpu-Mir-281  Ebu-Mir-281  Esc-Mir-281  Hme-Mir-281  Isc-Mir-281  Npo-Mir-281  Obi-Mir-281  Ovu-Mir-281  Pfl-Mir-281  Sko-Mir-281  Sme-Mir-281  Sto-Mir-281  Tca-Mir-281 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013666563.1: 344177-344234 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UACGGCAAGUAAAAAGAAGUGUCGCUGUCAAAGAGAGCUCAUCAUGAACAGUGUGAACAUACCAACUGUCAUGGAGCUGCUCUCUUUAUGGAAACACUCGAUUACGGCAGUUUGUCUA
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Structure
        10           20        30        40         50        
UACGGCAAGUAAAAAGA---|    CG    C         UCA-      A    GUGAA 
                    AGUGU  CUGU AAAGAGAGC    UCAUGA CAGU     C
                    UCACA  GGUA UUUCUCUCG    GGUACU GUCA     A
AUCUGUUUGACGGCAUUAGC^    AA    -         UCGA      -    ACCAU 
      110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Mature sequence

Lpo-Mir-281-P13_5p
mirBase accessionNone
Sequence 
0- AAGAGAGCUCAUCAUGAACAGU -22
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Star sequence

Lpo-Mir-281-P13_3p*
mirBase accessionNone
Sequence 
36- UGUCAUGGAGCUGCUCUCUUUA -58
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