MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-15-P1a2

Family name MIR-15 (all species)
Seed AGCAGCA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-15-P1b  Mal-Mir-15-P2a2  Mal-Mir-15-P2b  Mal-Mir-15-P2d 
Orthologues Ami-Mir-15-P1a  Bta-Mir-15-P1a  Cfa-Mir-15-P1a  Cin-Mir-15-P1  Cja-Mir-15-P1a  Cli-Mir-15-P1a  Cmi-Mir-15-P1a  Cpi-Mir-15-P1a  Cpo-Mir-15-P1a  Dno-Mir-15-P1a  Dre-Mir-15-P1a2  Eca-Mir-15-P1a  Ete-Mir-15-P1a  Gga-Mir-15-P1a  Gja-Mir-15-P1a  Gmo-Mir-15-P1a2  Hsa-Mir-15-P1a  Laf-Mir-15-P1a  Lch-Mir-15-P1a  Loc-Mir-15-P1a  Mdo-Mir-15-P1a  Mml-Mir-15-P1a  Mmr-Mir-15-P1a  Mmu-Mir-15-P1a  Mun-Mir-15-P1a  Neu-Mir-15-P1a  Oan-Mir-15-P1a  Ocu-Mir-15-P1a  Pab-Mir-15-P1a  Rno-Mir-15-P1a  Sha-Mir-15-P1a  Spt-Mir-15-P1a  Sto-Mir-15-P1a  Tgu-Mir-15-P1a  Tni-Mir-15-P1a2  Xtr-Mir-15-P1a 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Olfactores
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884787.1: 2302995-2303053 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGACGGUGACUUUAUUUCUGGUGAUGCUGUAGCAGCACGGAAUGGUUUGUGGGUUACACUGAGAUACAGGCCAUACUGUGCUGCUGCAUUAAAACCUGAAUACACAUCCUGUUCUUCG
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Structure
        10          20        30        40        50         
GGGACGGUGACUUUAUU--| U   GA  C             A          GGUUAC 
                   UC GGU  UG UGUAGCAGCACGG AUGGUUUGUG      \
                   AG CCA  AU ACGUCGUCGUGUC UACCGGACAU      A
GCUUCUUGUCCUACACAUA^ U   AA  U             A          AGAGUC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-15-P1a2_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACGGAAUGGUUUGUG -22
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Star sequence

Mal-Mir-15-P1a2_3p*
mirBase accessionNone
Sequence 
37- CAGGCCAUACUGUGCUGCUGCA -59
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