MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-155

Family name MIR-155 (all species)
Seed UAAUGCU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-155  Ami-Mir-155  Bta-Mir-155  Cfa-Mir-155  Cja-Mir-155  Cli-Mir-155  Cmi-Mir-155  Cpi-Mir-155  Cpo-Mir-155  Dno-Mir-155  Dre-Mir-155  Ebu-Mir-155  Eca-Mir-155  Ete-Mir-155  Gga-Mir-155  Gja-Mir-155  Gmo-Mir-155  Hsa-Mir-155  Laf-Mir-155  Lch-Mir-155  Loc-Mir-155  Mdo-Mir-155  Mml-Mir-155  Mmr-Mir-155  Mmu-Mir-155  Mun-Mir-155  Neu-Mir-155  Oan-Mir-155  Ocu-Mir-155  Pab-Mir-155  Pbv-Mir-155  Pma-Mir-155  Rno-Mir-155  Sha-Mir-155  Spt-Mir-155-P3  Spt-Mir-155-P4  Sto-Mir-155  Tgu-Mir-155  Tni-Mir-155  Xla-Mir-155-P1  Xla-Mir-155-P2  Xtr-Mir-155 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884692.1: 2397468-2397527 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAGCCAUCAAGUCUAGUCCCAGAUUGAGGAUAAUGCUAAUCGUGAUAGGGGUUGUUCAUUACCAGACACCUAACAUGUUAGCAUUAGCUUCGCUUUGGGAAAUUUUCGCACAAAACUAA
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Structure
        10          20        30        40        50          
ACAGCCAUCAAGUCUAG--|      U     A         U    A    G  UGUUCA 
                   UCCCAGA UGAGG UAAUGCUAA CGUG UAGG GU      \
                   AGGGUUU GCUUC AUUACGAUU GUAC AUCC CA      U
AAUCAAAACACGCUUUUAA^      C     G         -    A    A  GACCAU 
.       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-155_5p
mirBase accessionNone
Sequence 
0- AUAAUGCUAAUCGUGAUAGGGGU -23
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Star sequence

Mal-Mir-155_3p* (predicted)
mirBase accessionNone
Sequence 
38- ACCUAACAUGUUAGCAUUAGCU -60
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