| MirGeneDB ID | Mal-Mir-203-P2-v1 |
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| Family name |
MIR-203 (all species) |
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| Seed |
UGAAAUG |
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| Species |
Asian swamp eel (Monopterus albus) |
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| MiRBase ID |
|
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| Paralogues |
Mal-Mir-203-P1-v1
Mal-Mir-203-P1-v2
Mal-Mir-203-P2-v2
|
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| Orthologues |
Dre-Mir-203-P2-v1
Dre-Mir-203-P2-v2
Gmo-Mir-203-P2-v1
Gmo-Mir-203-P2-v2
Lch-Mir-203
Pma-Mir-203-o2-v1
Pma-Mir-203-o2-v2
Spt-Mir-203
Tni-Mir-203-P2-v1
Tni-Mir-203-P2-v2
|
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| Node of Origin (locus) |
Clupeocephala
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(GCA_001952655.1_M_albus_1.0_genomic) |
KV884701.1: 1040825-1040884 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CCUAGAAGAAGUGCCUAGUCUCGCUGAUUAAGUGGUUCUUAACAGUUCAACAGUUCUUUGACAAAAUUGUGAAAUGUUUAGGACCACUUGACCAGUCAGACAAAUGCUGCCAGCUUUUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCUAGAAGAAGUGCCUA--| C A U G A GUUCUUU
GUCU GCUG UUAAGUGGUUCU AACA UUCA CA \
CAGA UGAC AGUUCACCAGGA UUGU AAGU GU G
AGUUUUCGACCGUCGUAAA^ C C U A - UAAAACA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Mal-Mir-203-P2-v1_5p* |
| mirBase accession | None |
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| Sequence |
0- AGUGGUUCUUAACAGUUCAACA -22
Get sequence
|
|---|
| Mature sequence |
Mal-Mir-203-P2-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
38- GUGAAAUGUUUAGGACCACUUG -60
Get sequence
|
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